Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792185.1_cds_XP_016511013.1_2305
CDS Infomation

[gene=LOC107828243] [db_xref=GeneID:107828243] [protein=probable protein phosphatase 2C 47] [protein_id=XP_016511013.1] [location=complement(join(20971..21526,22283..22488,23077..23271,24057..24266))] [gbkey=CDS]
Sequence

ATGGAAGAAATGATGGCACCAGGCACCAGTATGTTACCCTGTAATGGGGAAATAGAGAAT
GGTTTCTGTAAGGGAAATATGTCAGCAATTGAAGAAAATAAAGAAATATCTGATGATTTG
AATCAGCCAAATGCAGGGAAGCCACCAAGAAACAATCCAGGGATGAGGCATTGTATTAGC
CAAGCTAGCTTGGCAGCTACTTCTGCATTGGAACCAAAAACAGTAATGATCGGTCTGAGA
TCACCATCAAGTGACAATTGTGCTTATGTCCCCATCTTTCGCTCAGGAAGCTGTTCTGAC
ATGGGACCCAAAACGTACATGGAAGATGAACATATCCGTGTTGATAATCTTCGGGAATAT
GTTGATGACTCCAAAGGTCTTCTTTCACAAGGAGCATTTTATGGTGTGTTTGATGGCCAT
GGTGGCGTTGATGCTGCATCATTCACTCAGAAGAATCTCCTTAAATTTATTGTAAATGAT
TCCCATTTTCCATCGATGGTAAAAAAAGCTGTCAGGAATGCTTTTGCAAAAGCTGATAAT
GCGCTAGCTTATACGAAGTCTCTTGATAGTACCTCTGGAACAACTGCTCTGGTCGCACTT
ATTTTAGGAAGGACCATGCTAATAGCTAATGCTGGGGACTCTCGAGCTGTACTAGGGAAG
CGCGGAAGAGCAATTGAATTGTCAAAAGACCACAAGCCAAATGCTACTTCCGAGAAATTG
AGAATTGAAAAACTAGGGGGAACAATTTTTGATGGCTACCTCAATGGTCAGCTGTCCGTT
GCACGAGCACTGGGCGACTGGCATATAAAGGGCGCCAAAGGTTCAAAGGGACCCTTAAGC
TCAGAGCCGGAGTTCGAAGAGGTGGTCCTGTCAGAAGAGGATGAGTTCTTAATAATTGGT
TGCGATGGCTTATGGGATGTCATGAGTAGCCAATACGCAGTAACAATCGTAAGAAAGGAA
CTCATGCTGCATAATGATCCCGAGAAATGCTCAAAATTTCTTGTCAAGGAGGCACTAAAG
CGTAACAGTTGTGATAATCTAACCGCTCTTGTAATCTGCTTCTCTCATGATCCGCCACCT
CGAATTGAAATACCAAGAACTACAAGGAGGAGAAGTATATCAGCTGAAGGACTGGATCTT
TTAAAGGGGGTGTTAAGTGACATATAA

Peptide Sequence

PEP ID

XP_016511013.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 47 [Nicotiana tabacum]
Sequence

MEEMMAPGTSMLPCNGEIENGFCKGNMSAIEENKEISDDLNQPNAGKPPRNNPGMRHCIS
QASLAATSALEPKTVMIGLRSPSSDNCAYVPIFRSGSCSDMGPKTYMEDEHIRVDNLREY
VDDSKGLLSQGAFYGVFDGHGGVDAASFTQKNLLKFIVNDSHFPSMVKKAVRNAFAKADN
ALAYTKSLDSTSGTTALVALILGRTMLIANAGDSRAVLGKRGRAIELSKDHKPNATSEKL
RIEKLGGTIFDGYLNGQLSVARALGDWHIKGAKGSKGPLSSEPEFEEVVLSEEDEFLIIG
CDGLWDVMSSQYAVTIVRKELMLHNDPEKCSKFLVKEALKRNSCDNLTALVICFSHDPPP
RIEIPRTTRRRSISAEGLDLLKGVLSDI

Transcript Sequence

Gene sequence data has not been registered.